Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs35848276 | chr6:27521096 | C/T | 1.98E-7 | 213 | 16.45 | 15.02 | 9.77 | KM Plot |
| KIRP | rs35872576 | chr10:102011027 | T/C | 6.35E-6 | 213 | 16.43 | 22.77 | 3.6 | KM Plot |
| KIRP | rs35883476 | chr6:28368508 | G/C | 2.08E-7 | 211 | 16.43 | 13.6 | 9.77 | KM Plot |
| KIRP | rs35898546 | chr14:74293334 | C/T | 0.000331 | 213 | 16.97 | 18.23 | 6.57 | KM Plot |
| KIRP | rs35902873 | chr6:28058949 | G/C | 4.75E-7 | 213 | 15.88 | 16.68 | 9.77 | KM Plot |
| KIRP | rs35929737 | chr5:79954593 | T/TA | 0.000112 | 211 | 18.65 | 14.97 | 9.77 | KM Plot |
| KIRP | rs35931739 | chr3:190115118 | TAGA/T | 9.79E-5 | 214 | 13.73 | 19.92 | 12.1 | KM Plot |
| KIRP | rs35934643 | chr6:26355094 | G/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs35952432 | chr6:28074901 | C/T | 2.69E-7 | 211 | 15.88 | 15.02 | 9.77 | KM Plot |
| KIRP | rs35989335 | chr10:63379215 | A/C | 0 | 212 | 18.02 | 9 | 1.17 | KM Plot |
| KIRP | rs36052614 | chr15:24508577 | T/C | 2.6E-5 | 206 | 17.52 | 14.53 | 10.23 | KM Plot |
| KIRP | rs36062436 | chr16:4533404 | GTTAC/G | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs36085789 | chr10:70663511 | C/A | 7.37E-9 | 214 | 15.2 | 16.97 | 10.6 | KM Plot |
| KIRP | rs36094793 | chr1:95290315 | A/G | 2.26E-5 | 211 | 16.43 | 17.02 | 13.85 | KM Plot |
| KIRP | rs36101351 | chr6:27943369 | C/T | 4.74E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |